Try it out first without the baffle. If the sound level is acceptable, then fine. If not, then you can try different maps, but make sure to contact someone with remus firts. Take a look at this thread
http://www.supermotojunkie.com/showt...Y-thread/page3
SIngle cilinders are a bit hard on exhausts (because of backpressure needs). For example, FMF has stopped selling duke model because of different running problems. So far, the best one running on the bike is Leovince with stock map, but knowing that you only improve sound, fairly non power or torque.
Akra exhaust with its map is (for the price and sometimes problems) not the best choice.
Hope this helps.